A BOLD signal in the hippocampus ambiguous

When you see a red blob on an fMRI activity map, what do you think? We all know fMRI doesn’t directly measure neural activity, yet an increased BOLD (blood oxygen level dependent) response is commonly used as a proxy for elevated “brain activity”. This interpretation is, in fact, strongly supported by studies identifying a relationship between the BOLD response and underlying neural activity. In particular, this signal correlates most strongly with the LFP (local field potential), suggesting that synaptic potentials – rather than spiking – primarily drive the BOLD signal 1.

But what about those blue blobs on that brain map? What exactly does a negative BOLD response represent? Do BOLD signal increases and decreases respectively represent neural activation and deactivation, as we often presume? Neuroscientists know the story isn’t that simple, yet still, we often construct our interpretations according to such idyllic principles.

fMRI 101


In fMRI 101 we learned that the BOLD response results from changes in the relative amounts of oxygenated and deoxygenated hemoglobin, which – because of their distinct magnetic properties – are respectively associated with BOLD signal increases and decreases. When a brain region becomes active and requires energy, oxygen metabolism (CMRO2) increases, reducing blood oxygenation levels. A coincident increase in cerebral blood flow (CBF) partially counteracts this by delivering more oxygenated blood to the area. Since the BOLD signal increases with higher blood oxygenation, the direction of the BOLD response depends on the relative change in CBF and CMRO2. Since the increase in oxygenated blood flow typically exceeds that of oxygen metabolism, elevated neural activity (usually) leads to a positive BOLD response. So if a positive fMRI activation reflects increased blood blow and metabolism, negative activity should reflect the opposite … right?

Hippocampus ambiguous

One oft-overlooked feature of this mechanism is that the coupling between blood flow and metabolism varies across brain regions. Across the cortex, the coupling ratio between CBF and CMRO2 is heterogeneous but generally high, on the order of 2 to 4.5 2,3, generating a reliably positive BOLD signal with activation. But recent studies have shown that other regions have lower coupling ratios. Of particular concern is the hippocampus, with an estimated coupling ratio of 1.7 4. One possible reason for this discrepancy is the remarkably poor vascular supply to the hippocampus compared to the surrounding cortex 5. Thus, hippocampal activation would result in a notably reduced BOLD response compared to a cortical activation. As this CBF:CMRO2 coupling ratio flirts dangerously with unity, it raises concern that in certain situations it might dip to or below one, resulting in no change, or even a negative BOLD response, following neural activation. Indeed, upon stimulating neural activity (by inducing seizures) in rats, researchers observed a positive BOLD signal in the cortex, but a negative signal in the hippocampus 6.

What’s a hippocampal imager to do?

So what does all this mean for us foolish – I mean, unfortunate – cognitive neuroscientists using fMRI to study the hippocampus? For one, we face vastly greater challenges to interpreting our data than our lucky cortical colleagues. When the hippocampus activates, we can be relatively confident that blood flow and metabolism (and presumably, underlying neural activity) are concurrently elevated. But a deactivated hippocampus is an ambiguous hippocampus. A negative BOLD response could theoretically indicate an underlying decrease or increase in both or either parameters. Let’s explore three alternative scenarios which could theoretically engender a negative hippocampal BOLD signal.

1. ↓ CBF, ↓ CMRO2. The most intuitive explanation is that neural activity declines, reducing both blood flow and oxygen metabolism within the region. This scenario is certainly feasible if the hippocampus maintains a certain level of tonic activity and a given condition actively suppresses it below baseline.

2.  CBF, = CMRO2. Since the ratio of CBF to CMRO2 is the key determinant of the BOLD response, a change in oxygen metabolism is not requisite for a negative BOLD signal if blood flow alone declines. Such is the premise for the “vascular steal” hypothesis, which posits that blood is diverted from less critical regions to those directly involved in the task at hand, regardless of any change in oxygen consumption.

3.  CBF,  CMRO2. While the former two scenarios imply reduced hippocampal recruitment, either metabolic or vascular, a final scenario entails the opposite: elevated blood flow and metabolism drive the negative BOLD. Because of the hippocampus’ problematic coupling ratio, if the metabolic increase exceeds the blood flow increase, this manifests as a negative response.

Alternative interpretations

To disambiguate these alternatives, we must think outside the blob and interpret our effects in light of integrated electrophysiology, lesion and cognitive psychology findings. Two examples from recent fMRI studies illustrate the aforementioned challenges as well as how alternative explanations best account for a task-induced hippocampal deactivation.

First (shameless self-promotion alert!), during effortful memory retrieval, we consistently observe a negative hippocampal response 7-9. What might this signal represent? Given that the hippocampus is critically involved in encoding new memories 10, it’s possible that it remains continuously “online”, storing features of our ongoing experience into memory. Now, when one engages in a difficult mental task, such as trying to recall a weak memory, attention is diverted away from encoding irrelevant background information towards the target task. Scenario one would nicely account for this observation, as hippocampal neural activity dips below its baseline level and generates a negative BOLD. Considering that this negative response correlates with task difficulty (indexed by either response times or memory strength) and impaired encoding of the background environment, this seems like the most logical scenario. For now, that’s our story and we’re sticking with it (but please get in touch if you have other ideas!)

Yet in other situations, negative hippocampal responses have been observed during conditions in which, based on lesion and electrophysiological studies, one might expect the hippocampus to activate. For instance, a recent study observed hippocampal deactivation during landmark-based spatial memory retrieval 11. In this case, as the authors propose, the task-induced deactivation just might reflect neural activation.

Of course, we can’t simply choose a preferred explanation at whim that best supports our hypothesis. Au contraire, carefully considering the complicated nature of the hippocampal BOLD response might help expand our too-often blob-centric minds, and set a framework from some pretty awesome multi-modal hypothesis testing. Science isn’t supposed to be easy, but it can still be fun. Now, who else is eager to go crazy with some hippocampal calibrated fMRI and depth recordings?


1. Logothetis NK & Wandell BA. 2004. Interpreting the BOLD signal. Annu Rev Physiol 66:735-69.
2. Hoge RD et al. 1999. Linear coupling between cerebral blood flow and oxygen consumption in activated human cortex. Proc Natl Acad Sci U S A 96:9403-8.
3. Leontiev O et al. 2007. CBF/CMRO2 coupling measured with calibrated BOLD fMRI: sources of bias. Neuroimage. 36:1110-22.
4. Restom K et al. 2008. Calibrated fMRI in the medial temporal lobe during a memory-encoding task. Neuroimage. 40:1495-1502.
5. Borowsky IW & Collins RC. 1989. Metabolic anatomy of brain: a comparison of regional capillary density, glucose metabolism, and enzyme activities. J Comp Neurol. 288:401-13.
6. Schridde U et al. 2008. Negative BOLD with large increases in neuronal activity. Cereb Cortex. 18:1814-27.
7. Reas ET & Brewer JB. 2013a. Effortful retrieval reduces hippocampal activity and impairs incidental encoding. Hippocampus. 23:367-79.
8. Reas ET & Brewer JB. 2013b. Imbalance of incidental encoding across tasks: An explanation for non-memory-related hippocampal activations? J Exp Psych-Gen. 142:1171-9.
9. Reas ET et al. 2011. Search-related suppression of hippocampus and default network activity during associative memory retrieval. Front Hum Neurosci. 5:112.
10. Squire LR et al. 2004. The medial temporal lobe. Annu Rev Neurosci. 27:279-306.
11. Nilsson J et al. 2013. Negative BOLD response in the hippocampus during short-term spatial memory retrieval. J Cogn Neurosci. 25:1358-71.

Reas ET, & Brewer JB (2013). Imbalance of incidental encoding across tasks: An explanation for non-memory-related hippocampal activations? Journal of experimental psychology. General, 142 (4), 1171-9 PMID: 23773160

Tagged , , , , , ,

One thought on “A BOLD signal in the hippocampus ambiguous

  1. Good post! Very thorough. Not much to add except that spatial resolution is often overlooked when discussing activation polarity (and strength). The amount of volume averaging of “active” versus inactive components in the voxel is one issue. We tend to think of fMRI maps in continuous space, but we should always be mindful of the effects of a digitized brain. A typical “grey matter” voxel with 3 mm dimensions may contain a non-trivial amount of CSF, for example. In some parts of the brain the volume change associated with (de)activation of GM may result in a concomitant CSF volume change that can wash out or even reverse the signal change accompanying “activation.” Auditory cortex is one such area of concern. (See Scouten & Constable 2007 and 2008, PMIDs 17654574 & 18228581.) Perhaps the hippocampus is another one.

Leave a Reply

Fill in your details below or click an icon to log in:

WordPress.com Logo

You are commenting using your WordPress.com account. Log Out /  Change )

Google photo

You are commenting using your Google account. Log Out /  Change )

Twitter picture

You are commenting using your Twitter account. Log Out /  Change )

Facebook photo

You are commenting using your Facebook account. Log Out /  Change )

Connecting to %s

%d bloggers like this: